Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | K8M09_00240 | P55652 | - | 46844 - 49171 | 82218.8 |
| ribokinase | K8M09_00245 | P0A9J7 | - | 49414 - 50316 | 30720.9 |
| dna recombination protein rmuc | K8M09_00250 | Q9I4U3 | - | 50360 - 51553 | 44092.9 |
| peptide deformylase | K8M09_00255 | Q92SH6 | + | 51665 - 52189 | 19417.8 |
| methionyl-trna formyltransferase | K8M09_00260 | B9JQX1 | + | 52234 - 53175 | 33160.3 |
| trna pseudouridine(38-40) synthase trua | K8M09_00265 | C3MF26 | + | 53175 - 53918 | 27337.5 |
| hypothetical protein | K8M09_00270 | Not Available | - | 53925 - 54521 | 21913.7 |
| succinyl-diaminopimelate desuccinylase | K8M09_00275 | Q1MM75 | - | 54508 - 55707 | 42752.8 |
| duf805 domain-containing protein | K8M09_00280 | Not Available | - | 55787 - 56173 | 14394.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | K8M09_00285 | C3MF35 | - | 56177 - 57034 | 30463.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.