Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | K8M09_10230 | Q57500 | - | 2037501 - 2038676 | 41299.1 |
| cyclase family protein | K8M09_10235 | A0NLY7 | + | 2038974 - 2039795 | 29208.4 |
| carboxymuconolactone decarboxylase family protein | K8M09_10240 | Not Available | + | 2039844 - 2040257 | 14848.8 |
| uvrd-helicase domain-containing protein | K8M09_10245 | Q92HZ6 | + | 2040360 - 2042819 | 92052.1 |
| duf2778 domain-containing protein | K8M09_10250 | Not Available | - | 2042848 - 2044041 | 43215.4 |
| amidase | K8M09_10255 | O28325 | - | 2044293 - 2045711 | 50403.0 |
| hypothetical protein | K8M09_10260 | Not Available | - | 2045785 - 2046882 | 41697.0 |
| duf1194 domain-containing protein | K8M09_10265 | Not Available | + | 2047051 - 2047833 | 27498.0 |
| hypothetical protein | K8M09_10270 | Not Available | + | 2047932 - 2048168 | 8793.66 |
| tetr family transcriptional regulator | K8M09_10275 | Q8G2M8 | - | 2048226 - 2048846 | 23249.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.