Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | K8M09_10080 | P96673 | - | 2004054 - 2004461 | 15291.5 |
| sdr family oxidoreductase | K8M09_10085 | P39315 | + | 2004612 - 2005499 | 30294.9 |
| pyridoxine 5'-phosphate synthase | K8M09_10090 | Q92NT6 | - | 2005536 - 2006288 | 27340.5 |
| hypothetical protein | K8M09_10095 | Not Available | + | 2006539 - 2007609 | 38412.9 |
| merr family transcriptional regulator | K8M09_10100 | Q51506 | + | 2007943 - 2008623 | 24996.1 |
| atp-dependent recd-like dna helicase | K8M09_10105 | Q9RT63 | - | 2008703 - 2009830 | 42113.9 |
| abrb family transcriptional regulator | K8M09_10110 | P75747 | + | 2009973 - 2011064 | 37636.4 |
| lyse family translocator | K8M09_10115 | A8A390 | - | 2011072 - 2011665 | 21338.7 |
| aldo/keto reductase | K8M09_10120 | P76234 | + | 2011786 - 2012631 | 30473.7 |
| acetolactate synthase small subunit | K8M09_10125 | O28555 | - | 2012699 - 2013271 | 20830.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.