Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 2-aminoethylphosphonate abc transporter atp-binding protein | K8M09_09980 | Q92UV5 | - | 1984192 - 1985277 | 38440.6 |
| extracellular solute-binding protein | K8M09_09985 | P43951 | - | 1985340 - 1986374 | 36848.0 |
| gntr family transcriptional regulator | K8M09_09990 | P76114 | + | 1986876 - 1987682 | 29375.3 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | K8M09_09995 | A0RJ78 | + | 1987687 - 1989090 | 49911.9 |
| glutamine synthetase family protein | K8M09_10000 | P78061 | + | 1989087 - 1990490 | 50555.3 |
| Trna-lys | Not Available | Not Available | + | 1990767 - 1990842 | Not Available |
| phzf family phenazine biosynthesis protein | K8M09_10010 | Q98KN6 | - | 1990961 - 1991878 | 32180.2 |
| endonuclease | K8M09_10015 | Not Available | - | 1991947 - 1993053 | 42335.3 |
| hypothetical protein | K8M09_10020 | Not Available | + | 1993209 - 1993799 | 21477.8 |
| lrp/asnc family transcriptional regulator | K8M09_10025 | Q9V1E5 | - | 1993810 - 1994226 | 15055.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.