Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | K8M09_09930 | A7MXY8 | - | 1974330 - 1975040 | 25157.0 |
| lysr family transcriptional regulator | K8M09_09935 | P25544 | + | 1975248 - 1976258 | 37032.4 |
| abc transporter permease | K8M09_09940 | P37624 | - | 1976412 - 1977524 | 40336.9 |
| abc transporter atp-binding protein | K8M09_09945 | P0A9U1 | - | 1977521 - 1978438 | 33171.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | K8M09_09950 | Q92V44 | - | 1978435 - 1979376 | 32846.1 |
| cerr family c-terminal domain-containing protein | K8M09_09955 | P0ACU0 | - | 1979369 - 1980004 | 23195.2 |
| sdr family oxidoreductase | K8M09_09960 | P17611 | - | 1980154 - 1980903 | 25518.3 |
| sdr family oxidoreductase | K8M09_09965 | Q9L9F8 | - | 1980913 - 1981692 | 26707.1 |
| histidinol phosphate phosphatase | K8M09_09970 | Q6NPM8 | - | 1981695 - 1982525 | 29156.9 |
| putative 2-aminoethylphosphonate abc transporter permease subunit | K8M09_09975 | Q44123 | - | 1982525 - 1984186 | 59605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.