Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1638 domain-containing protein | K8M09_09730 | Not Available | + | 1935196 - 1935837 | 23847.3 |
| formyl transferase | K8M09_09735 | B8J9P3 | + | 1935956 - 1936717 | 27751.8 |
| virulence factor | K8M09_09740 | Not Available | + | 1936827 - 1937129 | 11140.2 |
| methylenetetrahydrofolate reductase c-terminal domain-containing protein | K8M09_09745 | Not Available | + | 1937122 - 1937709 | 21573.9 |
| methylenetetrahydrofolate reductase | K8M09_09750 | O06745 | + | 1937713 - 1938807 | 39961.3 |
| methyltetrahydrofolate cobalamin methyltransferase | K8M09_09755 | Q46389 | + | 1938899 - 1939867 | 33802.0 |
| hypothetical protein | K8M09_09760 | Not Available | + | 1939869 - 1940192 | 11627.2 |
| askha domain-containing protein | K8M09_09765 | P0DX10 | + | 1940229 - 1942301 | 74902.3 |
| hypothetical protein | K8M09_09770 | Not Available | + | 1942372 - 1942776 | 14047.1 |
| lysr family transcriptional regulator | K8M09_09775 | P52662 | - | 1942822 - 1943739 | 33710.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.