Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | K8M09_09580 | Not Available | - | 1903250 - 1904182 | 33454.9 |
| adenosylcobinamide-phosphate synthase cbib | K8M09_09585 | P21634 | - | 1904250 - 1905230 | 34127.8 |
| threonine-phosphate decarboxylase cobd | K8M09_09590 | P21633 | - | 1905240 - 1906247 | 34483.7 |
| cobyrinate a,c-diamide synthase | K8M09_09595 | P21632 | - | 1906244 - 1907551 | 45393.6 |
| uroporphyrinogen-iii c-methyltransferase | K8M09_09600 | P21631 | - | 1907548 - 1908390 | 29251.5 |
| cobalamin biosynthesis protein | K8M09_09605 | P21635 | - | 1908390 - 1908866 | 16086.1 |
| tsup family transporter | K8M09_09610 | P29942 | + | 1909128 - 1909913 | 27185.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | K8M09_09615 | P29930 | - | 1909917 - 1910558 | 24189.2 |
| cobaltochelatase subunit cobn | K8M09_09620 | P29929 | - | 1910576 - 1914337 | 135699.0 |
| cobalamin biosynthesis protein cobw | K8M09_09625 | P29937 | - | 1914380 - 1915435 | 37741.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.