Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1176 domain-containing protein | K8M09_09230 | Not Available | + | 1833488 - 1834123 | 23264.2 |
| dmt family transporter | K8M09_09235 | Q1MIM3 | + | 1834209 - 1835114 | 31976.9 |
| molybdenum cofactor guanylyltransferase | K8M09_09240 | Q92PB2 | + | 1835188 - 1835823 | 22527.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | K8M09_09245 | P44902 | + | 1835820 - 1836338 | 18692.4 |
| ompa family protein | K8M09_09250 | P22263 | - | 1836403 - 1838559 | 80817.4 |
| abc transporter substrate-binding protein | K8M09_09255 | G3XD47 | + | 1838900 - 1839682 | 27729.0 |
| abc transporter permease | K8M09_09260 | P35118 | + | 1839847 - 1840650 | 28565.5 |
| abc transporter permease | K8M09_09265 | P35113 | + | 1840647 - 1841477 | 30635.2 |
| aspartate-semialdehyde dehydrogenase | K8M09_09270 | P12288 | + | 1841625 - 1841891 | 10610.9 |
| duf2270 domain-containing protein | K8M09_09275 | Not Available | - | 1841904 - 1842554 | 24570.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.