Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | K8M09_08830 | A6U9L2 | + | 1743606 - 1744370 | 28971.2 |
| phosphoribosylformylglycinamidine synthase subunit purs | K8M09_08835 | Q55842 | + | 1744398 - 1744640 | 8405.3 |
| hypothetical protein | K8M09_08840 | Not Available | + | 1744659 - 1744916 | 9870.8 |
| phosphoribosylformylglycinamidine synthase subunit purq | K8M09_08845 | Q92PI1 | + | 1744913 - 1745584 | 23638.6 |
| hypothetical protein | K8M09_08850 | Not Available | + | 1745632 - 1746024 | 13681.7 |
| duf1127 domain-containing protein | K8M09_08855 | P39390 | - | 1746031 - 1746255 | 8711.37 |
| plp-dependent aminotransferase family protein | K8M09_08860 | Q01856 | + | 1746350 - 1747771 | 51243.3 |
| phosphoribosylformylglycinamidine synthase subunit purl | K8M09_08865 | B3PPS1 | + | 1747875 - 1750112 | 79336.4 |
| bola family transcriptional regulator | K8M09_08870 | P73055 | + | 1750131 - 1750364 | 8178.9 |
| hypothetical protein | K8M09_08875 | Not Available | + | 1750370 - 1750633 | 9516.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.