Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | K8M09_08730 | P43935 | + | 1723613 - 1724437 | 30608.9 |
| m23 family metallopeptidase | K8M09_08735 | P0AFT0 | + | 1724535 - 1725815 | 46177.0 |
| dead/deah box helicase | K8M09_08740 | P25888 | + | 1726007 - 1727509 | 55650.4 |
| nudix domain-containing protein | K8M09_08745 | Q9CA40 | + | 1727519 - 1727956 | 16133.4 |
| tfox/sxy family protein | K8M09_08750 | Q5E4H8 | - | 1727929 - 1728246 | 11926.3 |
| molybdopterin-binding/glycosyltransferase family 2 protein | K8M09_08755 | Q1GTD8 | - | 1728249 - 1729859 | 55079.4 |
| xdhc family protein | K8M09_08760 | O32147 | - | 1729856 - 1730554 | 24704.8 |
| xdhc family protein | K8M09_08765 | P77183 | - | 1730554 - 1730874 | 11246.4 |
| vwa domain-containing protein | K8M09_08770 | Not Available | - | 1730891 - 1732108 | 45535.1 |
| moxr family atpase | K8M09_08775 | Q02239 | - | 1732111 - 1732986 | 32304.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.