Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufd | K8M09_08680 | Q55792 | - | 1709926 - 1711200 | 44737.1 |
| fe-s cluster assembly atpase sufc | K8M09_08685 | P77499 | - | 1711224 - 1711979 | 27511.2 |
| fe-s cluster assembly protein sufb | K8M09_08690 | Q55790 | - | 1712055 - 1713524 | 54764.9 |
| cysteine desulfurase | K8M09_08695 | P9WQ70 | - | 1713661 - 1714830 | 40331.8 |
| alpha/beta hydrolase | K8M09_08700 | Q9ZD73 | + | 1715043 - 1715720 | 25031.0 |
| ggdef domain-containing protein | K8M09_08705 | Q9KKZ4 | - | 1715781 - 1716959 | 41799.4 |
| anhydro-n-acetylmuramic acid kinase | K8M09_08710 | Q92PK6 | - | 1717052 - 1718185 | 39485.1 |
| tyrosine--trna ligase | K8M09_08715 | Q92PK5 | + | 1718277 - 1719530 | 45738.9 |
| duf3971 domain-containing protein | K8M09_08720 | Not Available | - | 1719579 - 1722971 | 119549.0 |
| peroxiredoxin | K8M09_08725 | Q83CY8 | + | 1723120 - 1723587 | 16768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.