Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | K8M09_08580 | P96631 | + | 1692722 - 1693132 | 15013.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | K8M09_08585 | P72324 | + | 1693211 - 1694338 | 39959.4 |
| gnat family n-acetyltransferase | K8M09_08590 | P0AEH3 | + | 1694338 - 1694799 | 16921.2 |
| yaii/yqxd family protein | K8M09_08595 | Q8UFC0 | + | 1694843 - 1695316 | 16903.1 |
| duf1345 domain-containing protein | K8M09_08600 | Not Available | + | 1695313 - 1695969 | 23193.1 |
| s-formylglutathione hydrolase | K8M09_08605 | A1AXZ2 | + | 1695989 - 1696822 | 31375.2 |
| quaternary ammonium compound efflux smr transporter suge | K8M09_08610 | Q8FAL8 | + | 1696979 - 1697293 | 10846.0 |
| atpase | K8M09_08615 | Q8N5M1 | - | 1697367 - 1698152 | 28963.4 |
| had-ia family hydrolase | K8M09_08620 | Q55039 | - | 1698145 - 1698810 | 23924.8 |
| rlua family pseudouridine synthase | K8M09_08625 | Q9HZM9 | - | 1698810 - 1699805 | 37049.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.