Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1624 domain-containing protein | K8M09_08530 | Not Available | + | 1685634 - 1686674 | 37588.0 |
| isoprenylcysteine carboxylmethyltransferase family protein | K8M09_08535 | P29940 | + | 1686679 - 1687152 | 17380.6 |
| merr family dna-binding transcriptional regulator | K8M09_08540 | Q9X5V4 | - | 1687160 - 1687546 | 15099.3 |
| magnesium transporter | K8M09_08545 | O34442 | - | 1687612 - 1689042 | 52237.2 |
| peptide deformylase | K8M09_08550 | Q89N37 | + | 1689336 - 1689830 | 18507.5 |
| duf2171 domain-containing protein | K8M09_08555 | Not Available | + | 1689906 - 1690139 | 8755.23 |
| Trna-leu | Not Available | Not Available | + | 1690497 - 1690581 | Not Available |
| hypothetical protein | K8M09_08560 | Not Available | - | 1690215 - 1690526 | 11332.8 |
| lipoyl(octanoyl) transferase lipb | K8M09_08570 | Q92QD5 | + | 1690778 - 1691509 | 26811.9 |
| dmt family transporter | K8M09_08575 | Q1MIM3 | - | 1691613 - 1692566 | 34198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.