Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ba14k family protein | K8M09_08380 | A6X5T5 | + | 1655696 - 1656109 | 15359.0 |
| ctp synthase | K8M09_08385 | A6U8E2 | - | 1656198 - 1657826 | 59544.3 |
| preprotein translocase subunit secg | K8M09_08390 | P44713 | - | 1657972 - 1658460 | 15903.9 |
| triose-phosphate isomerase | K8M09_08395 | Q92QA1 | - | 1658587 - 1659357 | 26717.8 |
| caspase family protein | K8M09_08400 | Q9UDY8 | + | 1659523 - 1661103 | 55729.8 |
| hypothetical protein | K8M09_08405 | Not Available | + | 1661115 - 1661759 | 23101.6 |
| alpha/beta hydrolase | K8M09_08410 | Not Available | - | 1661764 - 1662648 | 31869.3 |
| dna topoisomerase iv subunit b | K8M09_08415 | P94281 | + | 1662857 - 1664932 | 75932.3 |
| hypothetical protein | K8M09_08420 | Not Available | + | 1665003 - 1665425 | 15010.8 |
| duf2336 domain-containing protein | K8M09_08425 | Not Available | - | 1665588 - 1666715 | 40125.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.