Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | K8M09_08230 | C3MBR1 | - | 1626787 - 1627254 | 17073.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | K8M09_08235 | Q92Q47 | - | 1627247 - 1628314 | 36659.6 |
| outer membrane protein assembly factor bama | K8M09_08240 | Q9K1H0 | - | 1628363 - 1630711 | 85096.3 |
| rip metalloprotease rsep | K8M09_08245 | Q8UFL7 | - | 1630949 - 1632082 | 40399.7 |
| phosphatidate cytidylyltransferase | K8M09_08250 | Q8YHH2 | - | 1632108 - 1632941 | 28961.0 |
| isoprenyl transferase | K8M09_08255 | Q92Q51 | - | 1632941 - 1633687 | 27288.8 |
| ribosome recycling factor | K8M09_08260 | Q92Q52 | - | 1633731 - 1634291 | 20783.0 |
| ump kinase | K8M09_08265 | Q92Q53 | - | 1634349 - 1635071 | 24893.2 |
| translation elongation factor ts | K8M09_08270 | B3PYP3 | - | 1635258 - 1636184 | 31998.3 |
| 30s ribosomal protein s2 | K8M09_08275 | Q8UFM3 | - | 1636425 - 1637186 | 27655.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.