Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtmp kinase | K8M09_08180 | Q92PW7 | - | 1619265 - 1619942 | 24200.1 |
| d-alanyl-d-alanine carboxypeptidase | K8M09_08185 | P08506 | - | 1620069 - 1621235 | 42515.2 |
| septal ring lytic transglycosylase rlpa family protein | K8M09_08190 | Q4ULW1 | - | 1621339 - 1622340 | 35504.3 |
| hypothetical protein | K8M09_08195 | Not Available | - | 1622565 - 1622780 | 8032.68 |
| Trna-ser | Not Available | Not Available | + | 1622909 - 1622998 | Not Available |
| universal stress protein | K8M09_08205 | Q57951 | - | 1623176 - 1623625 | 15795.2 |
| hypothetical protein | K8M09_08210 | Not Available | + | 1623624 - 1623842 | 8250.3 |
| lipid-a-disaccharide synthase | K8M09_08215 | Q3SRI5 | - | 1623880 - 1625094 | 44675.8 |
| udp-2,3-diacylglucosamine diphosphatase lpxi | K8M09_08220 | Q9A716 | - | 1625094 - 1625969 | 30734.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | K8M09_08225 | B3PYQ2 | - | 1625975 - 1626790 | 28090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.