Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | K8M09_07730 | Q04849 | + | 1522173 - 1523537 | 50458.1 |
| trk system potassium transporter trka | K8M09_07735 | Q04856 | + | 1523568 - 1524944 | 49896.4 |
| d-amino-acid transaminase | K8M09_07740 | P54694 | + | 1524952 - 1525815 | 31514.3 |
| rna chaperone hfq | K8M09_07745 | Q92Q84 | + | 1525912 - 1526154 | 9043.02 |
| gtpase hflx | K8M09_07750 | A0L4B2 | + | 1526232 - 1527557 | 48773.0 |
| nucleoside triphosphate pyrophosphohydrolase | K8M09_07755 | P0AEY4 | - | 1527746 - 1528582 | 31701.4 |
| nucleoside deaminase | K8M09_07760 | O34598 | - | 1528591 - 1529178 | 21960.9 |
| siroheme synthase cysg | K8M09_07765 | Q1H3L5 | + | 1529393 - 1530832 | 50784.1 |
| duf2849 domain-containing protein | K8M09_07770 | Not Available | + | 1530834 - 1531139 | 10796.9 |
| nitrite/sulfite reductase | K8M09_07775 | Q73XV0 | + | 1531150 - 1532823 | 61899.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.