Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional serine/threonine-protein kinase/universal stress protein | K8M09_07630 | P54744 | - | 1499738 - 1501141 | 51670.0 |
| metallophosphoesterase family protein | K8M09_07635 | Q58322 | - | 1501142 - 1501882 | 26062.2 |
| voc family protein | K8M09_07640 | Not Available | + | 1502081 - 1502974 | 32333.2 |
| 3-deoxy-8-phosphooctulonate synthase | K8M09_07645 | Q92Q99 | + | 1502976 - 1503815 | 29888.0 |
| phosphopyruvate hydratase | K8M09_07650 | A6U8E5 | + | 1503946 - 1505220 | 44913.2 |
| septum formation initiator family protein | K8M09_07655 | Q9ZDA9 | + | 1505669 - 1505977 | 12074.7 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | K8M09_07660 | Q9R9N5 | + | 1506127 - 1507173 | 38289.5 |
| pyruvate dehydrogenase complex e1 component subunit beta | K8M09_07665 | Q9R9N4 | + | 1507191 - 1508561 | 48400.6 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | K8M09_07670 | Q9R9N3 | + | 1508577 - 1509920 | 45648.1 |
| sgnh/gdsl hydrolase family protein | K8M09_07675 | Not Available | + | 1509936 - 1510577 | 22600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.