Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | K8M09_07480 | P29365 | + | 1477149 - 1478471 | 46173.8 |
| single-stranded-dna-specific exonuclease recj | K8M09_07485 | P21893 | + | 1478565 - 1480373 | 64396.3 |
| Trna-glu | Not Available | Not Available | + | 1480409 - 1480483 | Not Available |
| Trna-glu | Not Available | Not Available | + | 1480626 - 1480700 | Not Available |
| Trna-glu | Not Available | Not Available | + | 1480832 - 1480906 | Not Available |
| d-ala-d-ala carboxypeptidase family metallohydrolase | K8M09_07505 | P0AB08 | - | 1481046 - 1482266 | 42165.3 |
| lactoylglutathione lyase | K8M09_07510 | Q9KT93 | - | 1482625 - 1483065 | 16635.7 |
| cspa family cold shock protein | K8M09_07515 | Q9KL16 | + | 1483258 - 1483836 | 21531.1 |
| duf192 domain-containing protein | K8M09_07520 | Not Available | + | 1483836 - 1484336 | 18397.4 |
| hypothetical protein | K8M09_07525 | Not Available | - | 1484429 - 1484755 | 11605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.