Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase n-terminal domain-containing protein | K8M09_07330 | Q46845 | - | 1447568 - 1448272 | 25788.9 |
| peptide-methionine (s)-s-oxide reductase msra | K8M09_07335 | Q7UJI2 | - | 1448407 - 1448946 | 20095.2 |
| peptide-methionine (r)-s-oxide reductase msrb | K8M09_07340 | Q92Y46 | - | 1448948 - 1449391 | 16365.9 |
| lysr family transcriptional regulator | K8M09_07345 | P52667 | - | 1449542 - 1450417 | 32959.6 |
| bifunctional alpha/beta hydrolase/osmc family protein | K8M09_07350 | Not Available | + | 1450612 - 1451838 | 42649.8 |
| peptide-methionine (s)-s-oxide reductase msra | K8M09_07355 | Q5YUS0 | + | 1451866 - 1452402 | 20039.6 |
| zip family zinc transporter | K8M09_07360 | Not Available | + | 1452479 - 1453240 | 25745.0 |
| marr family winged helix-turn-helix transcriptional regulator | K8M09_07365 | P96708 | - | 1453261 - 1453755 | 17837.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | K8M09_07370 | P29272 | + | 1454439 - 1455446 | 35903.8 |
| xre family transcriptional regulator | K8M09_07375 | Not Available | + | 1455514 - 1455816 | 10775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.