Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | K8M09_07280 | B2VJ10 | - | 1438684 - 1439949 | 44295.5 |
| ferredoxin reductase | K8M09_07285 | P9WNE8 | - | 1440007 - 1440753 | 26736.0 |
| sulfite oxidase-like oxidoreductase | K8M09_07290 | O32103 | - | 1440746 - 1441351 | 22717.9 |
| tlpa family protein disulfide reductase | K8M09_07295 | Not Available | + | 1441860 - 1442333 | 17613.9 |
| dm13 domain-containing protein | K8M09_07300 | Not Available | + | 1442337 - 1442828 | 17972.7 |
| mfs transporter | K8M09_07305 | Q0TJF2 | + | 1442837 - 1443892 | 35692.5 |
| is3 family transposase | K8M09_07310 | P24577 | + | 1443943 - 1445129 | 44248.3 |
| hypothetical protein | K8M09_07315 | Not Available | - | 1445403 - 1445852 | 16525.3 |
| hypothetical protein | K8M09_07320 | Not Available | - | 1445939 - 1446499 | 20985.6 |
| magnesium and cobalt transport protein cora | K8M09_07325 | O31543 | - | 1446603 - 1447571 | 36544.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.