Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | K8M09_06630 | Q925Y6 | + | 1323851 - 1325026 | 42626.2 |
| Trna-trp | Not Available | Not Available | + | 1325239 - 1325314 | Not Available |
| preprotein translocase subunit sece | K8M09_06640 | Q9HWC3 | + | 1325507 - 1325707 | 7311.19 |
| transcription termination/antitermination protein nusg | K8M09_06645 | P65591 | + | 1325724 - 1326254 | 20003.8 |
| 50s ribosomal protein l11 | K8M09_06650 | B9JDR7 | + | 1326456 - 1326887 | 15165.8 |
| 50s ribosomal protein l1 | K8M09_06655 | B9JVM5 | + | 1326892 - 1327584 | 23951.5 |
| 50s ribosomal protein l10 | K8M09_06660 | Q8UE06 | + | 1327920 - 1328438 | 18086.1 |
| 50s ribosomal protein l7/l12 | K8M09_06665 | Q8UE07 | + | 1328499 - 1328876 | 12744.4 |
| dna-directed rna polymerase subunit beta | K8M09_06670 | Q8UE08 | + | 1329131 - 1333270 | 153488.0 |
| dna-directed rna polymerase subunit beta' | K8M09_06675 | Q92QH6 | + | 1333428 - 1337639 | 155233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.