Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit m | K8M09_06280 | P50974 | + | 1254434 - 1255945 | 55510.1 |
| nadh-quinone oxidoreductase subunit nuon | K8M09_06285 | Q92QN9 | + | 1255960 - 1257402 | 50860.7 |
| biotin--[acetyl-coa-carboxylase] ligase | K8M09_06290 | P29906 | + | 1257426 - 1258166 | 26392.8 |
| ribonuclease j | K8M09_06295 | M4MR97 | + | 1258182 - 1259849 | 60628.8 |
| duf1467 family protein | K8M09_06300 | Not Available | + | 1260091 - 1260360 | 9939.41 |
| hypothetical protein | K8M09_06305 | Not Available | + | 1260597 - 1260854 | 10017.5 |
| proline--trna ligase | K8M09_06310 | Q92QN2 | + | 1261066 - 1262394 | 49531.3 |
| lipoprotein-releasing abc transporter permease subunit | K8M09_06315 | P57061 | + | 1262423 - 1263727 | 46729.4 |
| abc transporter atp-binding protein | K8M09_06320 | Q92QN0 | + | 1263738 - 1264424 | 24518.4 |
| fg-gap repeat protein | K8M09_06325 | Not Available | - | 1264446 - 1265024 | 20533.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.