Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_06130 | Not Available | + | 1224157 - 1224579 | 14562.4 |
| protein translocase subunit secd | K8M09_06135 | Q2YNM0 | + | 1224688 - 1227225 | 90672.5 |
| fad-binding oxidoreductase | K8M09_06140 | Q9HXE3 | - | 1227278 - 1228402 | 39786.2 |
| lysr family transcriptional regulator | K8M09_06145 | P42722 | - | 1228481 - 1229437 | 34778.8 |
| transporter substrate-binding domain-containing protein | K8M09_06150 | G3XD47 | - | 1229839 - 1230615 | 28201.8 |
| aldo/keto reductase | K8M09_06155 | P46336 | - | 1230729 - 1231715 | 35648.5 |
| hutd family protein | K8M09_06160 | P24696 | - | 1231787 - 1232365 | 20001.2 |
| urocanate hydratase | K8M09_06165 | Q92V80 | - | 1232365 - 1234041 | 61124.8 |
| n-formylglutamate deformylase | K8M09_06170 | Q9HU92 | - | 1234058 - 1234858 | 29544.0 |
| histidine ammonia-lyase | K8M09_06175 | B9JDC0 | - | 1234860 - 1236395 | 52778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.