Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate acyltransferase plsx | K8M09_05640 | C3M9J5 | + | 1138136 - 1139191 | 37290.1 |
| ketoacyl-acp synthase iii | K8M09_05645 | Q92QT4 | + | 1139193 - 1140164 | 34287.9 |
| Trna-pro | Not Available | Not Available | + | 1183041 - 1183117 | Not Available |
| glsb/yeaq/ymge family stress response membrane protein | K8M09_05945 | Not Available | + | 1183234 - 1183485 | 8604.11 |
| glycosyltransferase | K8M09_05950 | D2Q1C4 | - | 1183544 - 1184698 | 40976.9 |
| o-antigen ligase family protein | K8M09_05955 | Not Available | - | 1184695 - 1185942 | 45703.4 |
| undecaprenyl-phosphate glucose phosphotransferase | K8M09_05960 | Q56770 | - | 1185939 - 1187489 | 58229.0 |
| glycosyltransferase family 4 protein | K8M09_05965 | Q94BX4 | - | 1187566 - 1188729 | 42433.4 |
| polysaccharide export protein | K8M09_05970 | Q02728 | - | 1188735 - 1189310 | 20704.9 |
| chain-length determining protein | K8M09_05975 | P33698 | + | 1189504 - 1191747 | 80221.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.