Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_05290 | Not Available | - | 1067470 - 1067736 | 9752.0 |
| purine permease | K8M09_05295 | P0AGN1 | + | 1067716 - 1069107 | 48174.4 |
| aldo/keto reductase | K8M09_05300 | P0A9T4 | - | 1069153 - 1070196 | 38384.7 |
| acp s-malonyltransferase | K8M09_05305 | P71019 | + | 1070391 - 1071335 | 32321.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | K8M09_05310 | P72332 | + | 1071359 - 1072096 | 25945.5 |
| acyl carrier protein | K8M09_05315 | P19372 | + | 1072381 - 1072617 | 8326.72 |
| beta-ketoacyl-acp synthase ii | K8M09_05320 | P56902 | + | 1072724 - 1073986 | 43987.4 |
| endolytic transglycosylase mltg | K8M09_05325 | P44720 | + | 1074111 - 1075280 | 43164.4 |
| yicc family protein | K8M09_05330 | P44726 | + | 1075490 - 1076377 | 31630.8 |
| guanylate kinase | K8M09_05335 | Q2KA85 | + | 1076381 - 1077040 | 25067.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.