Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad regulator | K8M09_05090 | Not Available | - | 1029354 - 1030331 | 36092.9 |
| tyrosine phosphatase family protein | K8M09_05095 | Not Available | - | 1030328 - 1030846 | 18111.2 |
| hd family hydrolase | K8M09_05100 | P42506 | - | 1030849 - 1031478 | 22769.4 |
| folate-binding protein ygfz | K8M09_05105 | A4R8F9 | - | 1031475 - 1032320 | 29895.7 |
| amino acid transporter | K8M09_05110 | Not Available | + | 1032486 - 1033091 | 22816.2 |
| hypothetical protein | K8M09_05115 | Not Available | - | 1033094 - 1033882 | 28507.9 |
| hypothetical protein | K8M09_05120 | Not Available | - | 1033899 - 1034168 | 9780.64 |
| tigr02301 family protein | K8M09_05125 | Not Available | - | 1034261 - 1034686 | 15472.4 |
| nudix hydrolase | K8M09_05130 | Q58549 | - | 1034683 - 1035117 | 15562.5 |
| is481 family transposase | K8M09_05135 | O31916 | + | 1035178 - 1035870 | 25759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.