Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| caspase family protein | K8M09_04890 | Q9UDY8 | + | 984696 - 988034 | 121470.0 |
| nad(p)h-dependent oxidoreductase | K8M09_04895 | Q28UD5 | - | 988104 - 988682 | 21257.0 |
| Trna-ser | Not Available | Not Available | + | 988847 - 988936 | Not Available |
| site-specific integrase | K8M09_04905 | P36932 | - | 989221 - 990075 | 32065.9 |
| porin | K8M09_04910 | P55448 | - | 990287 - 991411 | 40071.2 |
| porin | K8M09_04915 | P55448 | + | 992118 - 993242 | 40071.2 |
| alpha/beta hydrolase | K8M09_04920 | A2BGU9 | - | 993383 - 994258 | 31789.0 |
| lytic transglycosylase domain-containing protein | K8M09_04925 | P0AGC4 | - | 994443 - 996377 | 70738.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | K8M09_04930 | Q8UGL3 | + | 996839 - 997723 | 30956.2 |
| ssra-binding protein smpb | K8M09_04935 | B3PUN0 | + | 997725 - 998204 | 18652.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.