Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2207 domain-containing protein | K8M09_03540 | P45848 | + | 724973 - 726907 | 68937.9 |
| hypothetical protein | K8M09_03545 | Not Available | - | 726916 - 728013 | 39982.5 |
| tlya family rna methyltransferase | K8M09_03550 | P9WJ62 | + | 728147 - 728899 | 26242.5 |
| class i sam-dependent rna methyltransferase | K8M09_03555 | Q92RJ3 | + | 728896 - 730149 | 44334.5 |
| type ii toxin-antitoxin system vapc family toxin | K8M09_03560 | Q52562 | - | 730146 - 730574 | 15612.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | K8M09_03565 | Not Available | - | 730571 - 730825 | 9325.04 |
| methyl-accepting chemotaxis protein | K8M09_03570 | G3XD24 | - | 730941 - 733031 | 73552.2 |
| crotonase/enoyl-coa hydratase family protein | K8M09_03575 | Q5XIC0 | - | 733209 - 733970 | 26748.1 |
| acyl-coa dehydrogenase | K8M09_03580 | Q5LLW7 | - | 733980 - 735752 | 62217.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | K8M09_03585 | Q92RJ1 | - | 735965 - 737884 | 67753.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.