Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_02240 | P30864 | - | 457594 - 458475 | 32695.1 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | K8M09_02245 | Q9I702 | + | 458582 - 460078 | 53335.2 |
| duf898 domain-containing protein | K8M09_02250 | Q08022 | + | 460197 - 461288 | 39946.3 |
| m48 family metallopeptidase | K8M09_02255 | P25894 | + | 461278 - 462354 | 37956.3 |
| fe(3+) abc transporter substrate-binding protein | K8M09_02260 | P72827 | - | 462415 - 463458 | 37786.8 |
| iron-responsive transcriptional regulator rira | K8M09_02265 | Q9R9M8 | + | 463638 - 464099 | 16865.7 |
| response regulator | K8M09_02270 | Not Available | - | 464154 - 464561 | 14915.0 |
| luxr family transcriptional regulator | K8M09_02275 | Q89VI3 | - | 464690 - 465409 | 27040.2 |
| abc transporter substrate-binding protein | K8M09_02280 | P23847 | + | 465809 - 467404 | 58796.8 |
| abc transporter permease subunit | K8M09_02285 | A0A0H2ZGW7 | + | 467504 - 468508 | 36712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.