Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapb family antitoxin | K8M09_23280 | Q9X7L3 | + | 84189 - 84428 | 8944.73 |
| type ii toxin-antitoxin system vapc family toxin | K8M09_23285 | Q9X7L4 | + | 84428 - 84871 | 16262.5 |
| hypothetical protein | K8M09_23290 | Not Available | - | 84891 - 85322 | 15726.8 |
| helix-turn-helix domain-containing protein | K8M09_23295 | C1D3U5 | - | 85384 - 85698 | 11953.7 |
| single-stranded dna-binding protein | K8M09_23300 | Q9ZAQ8 | + | 86293 - 86622 | 12207.3 |
| hypothetical protein | K8M09_23305 | Not Available | - | 86705 - 86911 | 7436.06 |
| hypothetical protein | K8M09_23310 | Not Available | + | 87315 - 88328 | 37892.6 |
| type ii toxin-antitoxin system rele/pare family toxin | K8M09_23315 | P44031 | + | 88398 - 88751 | 13469.6 |
| helix-turn-helix domain-containing protein | K8M09_23320 | Not Available | + | 88748 - 89041 | 10994.1 |
| hypothetical protein | K8M09_23325 | Not Available | - | 89159 - 89455 | 11103.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.