Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein | K8M09_23180 | Q6FYW5 | - | 61440 - 62459 | 36671.3 |
| hypothetical protein | K8M09_23185 | Not Available | - | 62464 - 62637 | 5841.33 |
| type iv secretion system protein | K8M09_23190 | Not Available | - | 62644 - 63360 | 24595.4 |
| transglycosylase slt domain-containing protein | K8M09_23195 | O64046 | - | 63372 - 64535 | 41574.2 |
| virb4 family type iv secretion/conjugal transfer atpase | K8M09_23200 | Q6FYW7 | - | 64528 - 66939 | 89754.2 |
| virb3 family type iv secretion system protein | K8M09_23205 | Q2YIT7 | - | 66936 - 67226 | 11022.9 |
| trbc/virb2 family protein | K8M09_23210 | Q8KQC3 | - | 67228 - 67551 | 11299.1 |
| lytic transglycosylase domain-containing protein | K8M09_23215 | O31608 | - | 67601 - 68158 | 20388.2 |
| hypothetical protein | K8M09_23220 | Not Available | + | 68248 - 68865 | 22367.5 |
| thermonuclease family protein | K8M09_23225 | Not Available | + | 68855 - 69364 | 17493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.