Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent transferase | K8M09_21875 | Q9X0Z7 | + | 139281 - 140453 | 42170.7 |
| sugar abc transporter substrate-binding protein | K8M09_21880 | Q578M8 | + | 140491 - 141753 | 46394.2 |
| sugar abc transporter permease | K8M09_21885 | O51924 | + | 141849 - 142769 | 33685.0 |
| carbohydrate abc transporter permease | K8M09_21890 | Q7LYX6 | + | 142774 - 143604 | 30386.2 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | K8M09_21895 | Q98G42 | + | 143616 - 144683 | 38473.8 |
| transcriptional regulator beti | K8M09_21900 | B7M2V7 | - | 144705 - 145313 | 22503.4 |
| choline abc transporter substrate-binding protein | K8M09_21905 | Q9L4K3 | + | 145425 - 146354 | 33628.1 |
| alpha/beta hydrolase | K8M09_21910 | P07383 | + | 146351 - 147169 | 28817.6 |
| methylmalonyl-coa epimerase | K8M09_21915 | Q3IZP4 | - | 147176 - 147577 | 13823.6 |
| methylmalonyl-coa mutase | K8M09_21920 | O86028 | - | 147586 - 149715 | 76576.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.