Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | K8M09_21525 | Q1M7F4 | - | 61641 - 62237 | 22100.3 |
| murr/rpir family transcriptional regulator | K8M09_21530 | Q88P32 | - | 62328 - 63209 | 32341.8 |
| branched-chain amino acid abc transporter atp-binding protein/permease | K8M09_21535 | P21629 | + | 63376 - 65250 | 64973.6 |
| abc transporter substrate-binding protein | K8M09_21540 | Q1MDE9 | + | 65270 - 66424 | 39644.4 |
| abc transporter atp-binding protein | K8M09_21545 | P21630 | + | 66512 - 67246 | 26051.0 |
| branched-chain amino acid abc transporter permease | K8M09_21550 | P0AEX8 | + | 67269 - 68156 | 30796.3 |
| myg1 family protein | K8M09_21555 | Q9P7T6 | + | 68246 - 69172 | 32684.2 |
| l,d-transpeptidase | K8M09_21560 | P76193 | + | 69312 - 69920 | 22746.5 |
| ubid family decarboxylase | K8M09_21565 | Q7NQN3 | - | 70006 - 71517 | 55831.8 |
| scp2 sterol-binding domain-containing protein | K8M09_21570 | Not Available | + | 71638 - 72144 | 18211.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.