Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-ta family plp-dependent enzyme | K8M09_21225 | O82872 | - | 370466 - 371554 | 38581.0 |
| hypothetical protein | K8M09_21230 | Not Available | + | 371655 - 372272 | 22316.9 |
| plasmid partitioning protein repa | K8M09_21235 | P05682 | + | 1 - 1218 | 44481.2 |
| plasmid partitioning protein repb | K8M09_21240 | P55392 | + | 1441 - 2454 | 36610.9 |
| replication initiation protein repc | K8M09_21245 | P05684 | + | 2664 - 3983 | 48572.2 |
| flp pilus assembly complex atpase component tada | K8M09_21250 | P55389 | - | 3995 - 4700 | 26094.2 |
| type ii toxin-antitoxin system rele/pare family toxin | K8M09_21255 | O53468 | + | 4794 - 5159 | 14181.3 |
| helix-turn-helix domain-containing protein | K8M09_21260 | O53333 | + | 5152 - 5478 | 11933.2 |
| site-specific integrase | K8M09_21265 | O50655 | - | 5506 - 6618 | 40430.4 |
| duf1403 family protein | K8M09_21270 | Not Available | + | 6743 - 7696 | 33488.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.