Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha family protein | K8M09_20675 | O87386 | + | 232176 - 234983 | 100203.0 |
| sarcosine oxidase subunit gamma family protein | K8M09_20680 | Not Available | + | 234955 - 235506 | 19681.6 |
| branched-chain amino acid abc transporter substrate-binding protein | K8M09_20685 | Q8FYS6 | + | 235565 - 236680 | 39081.4 |
| diguanylate cyclase | K8M09_20690 | P55552 | + | 236914 - 238902 | 71839.3 |
| diguanylate cyclase | K8M09_20695 | Q9A5I5 | - | 238947 - 239888 | 35304.8 |
| abc transporter permease | K8M09_20700 | D4GPW1 | - | 240037 - 240948 | 30913.9 |
| abc transporter permease | K8M09_20705 | D4GPW2 | - | 240945 - 242036 | 38631.3 |
| abc transporter atp-binding protein | K8M09_20710 | D4GPW3 | - | 242033 - 243550 | 55015.1 |
| bmp family abc transporter substrate-binding protein | K8M09_20715 | Q2YKI6 | - | 243556 - 244653 | 38074.5 |
| amidohydrolase | K8M09_20720 | P95442 | - | 244677 - 246056 | 49702.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.