Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | K8M09_20625 | Q9I6J0 | - | 222139 - 223224 | 39559.1 |
| agmatine deiminase family protein | K8M09_20630 | B7V2K4 | - | 223274 - 224296 | 37412.5 |
| lysr family transcriptional regulator | K8M09_20635 | P0A9F8 | + | 224393 - 225280 | 32055.4 |
| dmt family transporter | K8M09_20640 | Not Available | - | 225294 - 226187 | 30442.7 |
| cupin domain-containing protein | K8M09_20645 | Not Available | - | 226307 - 226705 | 14315.9 |
| acetyl-coa c-acyltransferase | K8M09_20650 | Q8S4Y1 | + | 226867 - 228054 | 40569.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | K8M09_20655 | P55653 | - | 228073 - 229548 | 52288.7 |
| tetr/acrr family transcriptional regulator | K8M09_20660 | Not Available | + | 229767 - 230426 | 24514.3 |
| sarcosine oxidase subunit beta family protein | K8M09_20665 | Q52671 | + | 230648 - 231901 | 45020.0 |
| sarcosine oxidase subunit delta | K8M09_20670 | Q46336 | + | 231911 - 232195 | 10406.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.