Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K8M09_20375 | P0AFK8 | - | 168191 - 169021 | 30640.4 |
| abc transporter permease | K8M09_20380 | P45170 | - | 169032 - 169934 | 33079.9 |
| abc transporter atp-binding protein | K8M09_20385 | Q1AS06 | - | 169936 - 171018 | 38764.6 |
| spermidine/putrescine abc transporter substrate-binding protein | K8M09_20390 | P0A2C8 | + | 171228 - 172253 | 37584.2 |
| murr/rpir family transcriptional regulator | K8M09_20395 | Not Available | + | 172310 - 173164 | 31807.2 |
| yban family protein | K8M09_20400 | P0AAR6 | - | 173170 - 173535 | 13210.6 |
| duf2934 domain-containing protein | K8M09_20405 | Not Available | - | 173615 - 173878 | 9680.46 |
| monovalent cation/h+ antiporter subunit a | K8M09_20410 | Q52978 | + | 174742 - 177660 | 105768.0 |
| na+/h+ antiporter subunit c | K8M09_20415 | Q52980 | + | 177660 - 177998 | 11775.7 |
| monovalent cation/h+ antiporter subunit d | K8M09_20420 | Q52981 | + | 177995 - 179626 | 56481.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.