Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | K8M09_20125 | A1TXH7 | - | 116695 - 117177 | 17272.0 |
| abc transporter permease | K8M09_20130 | P0AFK8 | - | 117174 - 117962 | 28274.8 |
| abc transporter permease | K8M09_20135 | P31135 | - | 117966 - 118829 | 32142.2 |
| spermidine/putrescine abc transporter substrate-binding protein | K8M09_20140 | P0A2C8 | - | 119054 - 120130 | 39399.0 |
| tetr/acrr family transcriptional regulator | K8M09_20145 | P94548 | + | 120259 - 120885 | 23133.1 |
| nuclear transport factor 2 family protein | K8M09_20150 | Not Available | + | 120900 - 121292 | 14504.9 |
| type ii toxin-antitoxin system vapb family antitoxin | K8M09_20155 | Q05459 | + | 121355 - 121591 | 8923.48 |
| type ii toxin-antitoxin system vapc family toxin | K8M09_20160 | O06662 | + | 121591 - 121992 | 14823.8 |
| cu(i)-responsive transcriptional regulator | K8M09_20165 | P58379 | - | 121993 - 122403 | 15161.3 |
| heavy metal translocating p-type atpase | K8M09_20170 | Q9X5X3 | - | 122400 - 124862 | 84832.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.