Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | K8M09_20025 | P95629 | - | 97670 - 101332 | 130661.0 |
| hypothetical protein | K8M09_20030 | Not Available | - | 101368 - 101577 | 7825.36 |
| lrp/asnc ligand binding domain-containing protein | K8M09_20035 | Q44333 | + | 101743 - 102225 | 18059.8 |
| duf3008 family protein | K8M09_20040 | Not Available | + | 102313 - 102504 | 6598.95 |
| marr family transcriptional regulator | K8M09_20045 | Not Available | - | 102516 - 102971 | 17427.1 |
| homogentisate 1,2-dioxygenase | K8M09_20050 | B5ZZA8 | + | 103053 - 104381 | 49868.2 |
| duf2585 domain-containing protein | K8M09_20055 | A1B3B4 | - | 104384 - 104944 | 20712.5 |
| fumarylacetoacetate hydrolase family protein | K8M09_20060 | O28058 | + | 105058 - 106074 | 36257.0 |
| maleylacetoacetate isomerase | K8M09_20065 | Q9X4F7 | + | 106079 - 106723 | 23410.1 |
| type ii toxin-antitoxin system vapb family antitoxin | K8M09_20070 | Q9X7L3 | + | 106781 - 107020 | 8948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.