Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K8M09_19925 | Q57HE1 | - | 74743 - 75750 | 35378.7 |
| abc transporter permease | K8M09_19930 | Q83RD8 | - | 75756 - 76745 | 34277.4 |
| sugar abc transporter atp-binding protein | K8M09_19935 | Q8UA86 | - | 76758 - 78293 | 55179.2 |
| rhamnose abc transporter substrate-binding protein | K8M09_19940 | Q57HE0 | - | 78358 - 79353 | 34535.3 |
| deor/glpr family dna-binding transcription regulator | K8M09_19945 | Q328K6 | - | 79403 - 80215 | 29825.1 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | K8M09_19950 | P40747 | + | 80417 - 82513 | 75712.4 |
| l-rhamnose catabolism isomerase | K8M09_19955 | Q92S14 | + | 82538 - 83830 | 46821.2 |
| xaa-pro peptidase family protein | K8M09_19960 | O31689 | - | 83843 - 85072 | 43504.2 |
| abc transporter substrate-binding protein | K8M09_19965 | Q8ZQM3 | + | 85271 - 86794 | 55256.2 |
| abc transporter permease | K8M09_19970 | Q8FJK9 | + | 86870 - 87835 | 33916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.