Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein bugd | K8M09_19675 | P70791 | + | 8789 - 9772 | 34128.1 |
| tripartite tricarboxylate transporter tctb family protein | K8M09_19680 | P70794 | + | 9870 - 10331 | 16432.8 |
| tripartite tricarboxylate transporter permease | K8M09_19685 | P70795 | + | 10341 - 11846 | 52233.2 |
| deor/glpr family dna-binding transcription regulator | K8M09_19690 | P32144 | - | 11922 - 12683 | 26956.3 |
| phosphotransferase family protein | K8M09_19695 | P14181 | + | 12886 - 13797 | 33234.7 |
| fad-dependent oxidoreductase | K8M09_19700 | Q99LB7 | + | 13794 - 16235 | 88814.0 |
| metal/formaldehyde-sensitive transcriptional repressor | K8M09_19705 | P55757 | + | 16321 - 16593 | 9949.07 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | K8M09_19710 | Q8X400 | + | 16617 - 17567 | 33998.0 |
| substrate-binding domain-containing protein | K8M09_19715 | P39265 | + | 17822 - 18850 | 37235.3 |
| sugar abc transporter atp-binding protein | K8M09_19720 | Q2K204 | + | 18918 - 20444 | 54287.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.