Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | K8M09_19375 | P54910 | + | 3940963 - 3943413 | 89413.5 |
| p-type conjugative transfer protein trbj | K8M09_19380 | P54911 | + | 3943410 - 3944189 | 27668.9 |
| putative entry exclusion protein trbk-alt | K8M09_19385 | Not Available | + | 3944210 - 3944488 | 9977.05 |
| p-type conjugative transfer protein trbl | K8M09_19390 | P54913 | + | 3944492 - 3945853 | 44810.3 |
| conjugal transfer protein trbf | K8M09_19395 | P54914 | + | 3945853 - 3946542 | 25613.3 |
| p-type conjugative transfer protein trbg | K8M09_19400 | P55404 | + | 3946539 - 3947495 | 34111.8 |
| conjugal transfer protein trai | K8M09_19405 | P55406 | + | 3947492 - 3948628 | 39863.5 |
| duf2274 domain-containing protein | K8M09_19410 | Not Available | + | 3948632 - 3948847 | 7749.69 |
| alpa family transcriptional regulator | K8M09_19415 | P12552 | + | 3949098 - 3949367 | 10455.7 |
| tyrosine-type recombinase/integrase | K8M09_19420 | P32053 | - | 3949357 - 3950613 | 47762.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.