Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| invasion associated locus b family protein | K8M09_19325 | Q57F20 | + | 3933591 - 3934304 | 24023.6 |
| lysr family transcriptional regulator | K8M09_19330 | P77559 | + | 3934491 - 3935384 | 32398.8 |
| gnat family n-acetyltransferase | K8M09_19335 | A0JZC2 | - | 3935447 - 3935872 | 15613.6 |
| helix-turn-helix transcriptional regulator | K8M09_19340 | P55409 | - | 3935980 - 3936192 | 7621.29 |
| duf2285 domain-containing protein | K8M09_19345 | Not Available | + | 3936295 - 3936627 | 12944.3 |
| conjugal transfer protein trag | K8M09_19350 | Q00185 | + | 3936753 - 3938738 | 72546.9 |
| ribbon-helix-helix protein, copg family | K8M09_19355 | Not Available | + | 3938749 - 3939210 | 16712.0 |
| p-type conjugative transfer atpase trbb | K8M09_19360 | P55395 | + | 3939355 - 3940341 | 34547.6 |
| trbc/virb2 family protein | K8M09_19365 | P55396 | + | 3940338 - 3940670 | 11507.4 |
| virb3 family type iv secretion system protein | K8M09_19370 | Not Available | + | 3940670 - 3940948 | 9831.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.