Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | K8M09_18975 | Q92T50 | + | 3860416 - 3861729 | 45277.7 |
| tigr02281 family clan aa aspartic protease | K8M09_18980 | P29938 | - | 3861719 - 3862258 | 19069.9 |
| uracil phosphoribosyltransferase | K8M09_18985 | C3MBH2 | - | 3862384 - 3863013 | 23042.1 |
| adenosine deaminase | K8M09_18990 | C3MBH4 | - | 3863120 - 3864088 | 35230.6 |
| phosphopentomutase | K8M09_18995 | Q92T47 | - | 3864085 - 3865314 | 44095.4 |
| pilus assembly protein | K8M09_19000 | Not Available | - | 3865391 - 3866008 | 22319.1 |
| pilus assembly protein | K8M09_19005 | Not Available | - | 3866005 - 3866559 | 20629.7 |
| pilus assembly protein n-terminal domain-containing protein | K8M09_19010 | Not Available | - | 3866711 - 3867121 | 14511.3 |
| flp family type ivb pilin | K8M09_19015 | Not Available | + | 3867454 - 3867651 | 6670.07 |
| prepilin peptidase | K8M09_19020 | Not Available | + | 3867765 - 3868271 | 17549.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.