Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K8M09_18775 | Not Available | + | 3825362 - 3825889 | 19062.3 |
| transposase | K8M09_18780 | P55502 | + | 3826104 - 3826574 | 17289.6 |
| is66 family insertion sequence element accessory protein tnpb | K8M09_18785 | P55503 | + | 3826571 - 3826927 | 13019.1 |
| is66 family transposase | K8M09_18790 | P55504 | + | 3826976 - 3828550 | 57969.9 |
| yeca family protein | K8M09_18795 | P55505 | + | 3828547 - 3829110 | 21032.3 |
| hypothetical protein | K8M09_18800 | Not Available | + | 3829212 - 3829502 | 10957.0 |
| hypothetical protein | K8M09_18805 | Not Available | - | 3829900 - 3830115 | 7759.79 |
| hpp family protein | K8M09_18810 | Q55EF8 | + | 3830098 - 3831084 | 33817.4 |
| nadp-specific glutamate dehydrogenase | K8M09_18815 | P31026 | + | 3831176 - 3832528 | 48588.1 |
| hypothetical protein | K8M09_18820 | P0AFW6 | - | 3832544 - 3833047 | 18113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.