Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | K8M09_18625 | Q01610 | + | 3799115 - 3800011 | 33011.1 |
| gnat family n-acetyltransferase | K8M09_18630 | Q06592 | - | 3800002 - 3800445 | 16981.9 |
| gfo/idh/moca family oxidoreductase | K8M09_18635 | P49305 | + | 3800685 - 3801671 | 36378.0 |
| pyridoxamine 5'-phosphate oxidase family protein | K8M09_18640 | Not Available | - | 3801680 - 3802396 | 26173.3 |
| plp-dependent aminotransferase family protein | K8M09_18645 | P49309 | + | 3802450 - 3803874 | 50698.5 |
| type 1 glutamine amidotransferase | K8M09_18650 | P40194 | - | 3803871 - 3804596 | 25391.8 |
| transporter | K8M09_18655 | Q4QMI4 | - | 3804660 - 3805088 | 15765.2 |
| rok family transcriptional regulator | K8M09_18660 | D2PPN2 | - | 3805088 - 3806317 | 43900.1 |
| sugar abc transporter substrate-binding protein | K8M09_18665 | Q9F9B2 | + | 3806603 - 3807628 | 35222.1 |
| abc transporter permease | K8M09_18670 | Q9F9B1 | + | 3807885 - 3808976 | 38172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.