Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | K8M09_18525 | Q48935 | + | 3780059 - 3781084 | 36250.8 |
| eama family transporter | K8M09_18530 | P0AA69 | + | 3781183 - 3782058 | 30081.7 |
| ompa family protein | K8M09_18535 | P37665 | + | 3782136 - 3782798 | 23136.4 |
| truncated hemoglobin | K8M09_18540 | Q0PB48 | - | 3782806 - 3783267 | 17060.5 |
| lipo-like protein | K8M09_18545 | Not Available | - | 3783326 - 3784150 | 30755.1 |
| rubrerythrin family protein | K8M09_18550 | Not Available | + | 3784270 - 3785253 | 35844.1 |
| phenylalanine--trna ligase subunit beta | K8M09_18555 | Q92SS9 | - | 3785493 - 3787919 | 85733.9 |
| phenylalanine--trna ligase subunit alpha | K8M09_18560 | B9J7G4 | - | 3787942 - 3789027 | 40091.7 |
| lipopolysaccharide kinase inaa family protein | K8M09_18565 | P44162 | - | 3789020 - 3789886 | 31664.3 |
| 50s ribosomal protein l20 | K8M09_18570 | B9J7G2 | - | 3789975 - 3790379 | 15031.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.