Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella zoogloeoides |
| Strain | 1-16M |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella zoogloeoides 1-16M
Accession NumberCP086610.1
Gene Summary
Adenine Count
713258 bp
Thymine Count
704761 bp
Guanine Count
1279043 bp
Cytosine Count
1294829 bp
Genome Length
3991891 bp
Protein-coding Genes
3764 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate carboligase | K8M09_18225 | P0AEP8 | + | 3715017 - 3716804 | 64740.7 |
| hydroxypyruvate isomerase | K8M09_18230 | P30147 | + | 3716817 - 3717596 | 28471.9 |
| 2-hydroxy-3-oxopropionate reductase | K8M09_18235 | P77161 | + | 3717632 - 3718516 | 30716.2 |
| glycerate kinase | K8M09_18240 | Q44472 | + | 3718678 - 3719946 | 43597.1 |
| molecular chaperone dnaj | K8M09_18245 | P50018 | - | 3720002 - 3721135 | 40706.0 |
| molecular chaperone dnak | K8M09_18250 | P50019 | - | 3721360 - 3723258 | 67984.7 |
| hypothetical protein | K8M09_18255 | Not Available | + | 3723980 - 3724348 | 13747.3 |
| penicillin-binding protein | K8M09_18260 | O66874 | - | 3724422 - 3726650 | 79599.5 |
| ba14k family protein | K8M09_18265 | A6X5T5 | - | 3726790 - 3727257 | 17930.2 |
| lysylphosphatidylglycerol synthase domain-containing protein | K8M09_18270 | Q55979 | - | 3727357 - 3728304 | 34249.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.