Shinella zoogloeoides 1-16M

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella zoogloeoides
Strain1-16M

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shinella zoogloeoides 1-16M

Accession NumberCP086610.1

Gene Summary

Adenine Count

713258 bp

Thymine Count

704761 bp

Guanine Count

1279043 bp

Cytosine Count

1294829 bp

Genome Length

3991891 bp

Protein-coding Genes

3764 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hydroxyisourate hydrolaseK8M09_18175Q92VB9+3704529 - 370489413150.5
xanthine dehydrogenase small subunitK8M09_18180Q12553+3704899 - 370638353052.9
xanthine dehydrogenase molybdopterin binding subunitK8M09_18185Q54FB7+3706387 - 370874485504.5
xanthine dehydrogenase accessory protein xdhcK8M09_18190Q46808+3708749 - 370959429674.9
type ii toxin-antitoxin system vapc family toxinK8M09_18195P55511-3709595 - 371002315462.6
type ii toxin-antitoxin system phd/yefm family antitoxinK8M09_18200Not Available-3710023 - 37102779432.79
lysr family transcriptional regulatorK8M09_18205P76250-3710316 - 371126335267.7
urate hydroxylase puudK8M09_18210Not Available+3711405 - 371264646157.1
guanine deaminaseK8M09_18215P76641+3712643 - 371395948190.2
iclr family transcriptional regulatorK8M09_18220A1B8Z4-3714026 - 371485329353.4

Displaying genes 3641 – 3650 of 4728 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites